Publications
Recent + Selected
Recent Selected Publications
Cancer Control & Population Sciences
Park H, Jiang X, Song HJ, Lo Re V 3rd, Childs-Kean LM, Lo-Ciganic WH, Cook RL, Nelson DR. The Impact of Direct-acting Antiviral Therapy on End Stage Liver Disease Among Individuals with Chronic Hepatitis C and Substance Use Disorders. Hepatology. 2021 Feb 5. doi: 10.1002/hep.31732. [Epub ahead of print] PubMed PMID: 33544904.
Vapiwala N, Wong JK, Handorf E, Paly J, Grewal A, Tendulkar R, Godfrey D, Carpenter D, Mendenhall NP, Henderson RH, Stish BJ, Vargas C, Salama JK, Davis BJ, Horwitz EM. A Pooled Toxicity Analysis of Moderately Hypofractionated Proton Beam Therapy and Intensity Modulated Radiation Therapy in Early-Stage Prostate Cancer Patients. Int J Radiat Oncol Biol Phys. 2021 Feb 1. pii: S0360-3016(21)00117-6. doi: 10.1016/j.ijrobp.2021.01.043. [Epub ahead of print] PubMed PMID: 33539968.
Salloum RG, Tan ASL, Thompson L. What Parents Need to Know About Teen Vaping and What They Can Do About It. JAMA Pediatr. 2021 Feb 22. doi: 10.1001/jamapediatrics.2020.6689. [Epub ahead of print] PubMed PMID: 33616645.
Neyroud D, Nosacka RL, Callaway CS, Trevino JG, Hu H, Judge SM, Judge AR. FoxP1 is a transcriptional repressor associated with cancer cachexia that induces skeletal muscle wasting and weakness. J Cachexia Sarcopenia Muscle. 2021 Feb 1. doi: 10.1002/jcsm.12666. [Epub ahead of print] PubMed PMID: 33527776.
Ospina NS. Thyroid nodule evaluation and management in older adults: A review of practical considerations for clinical endocrinologists. Endocr Pract. 2021 Feb 12. pii: S1530-891X(21)00045-8. doi: 10.1016/j.eprac.2021.02.003. [Epub ahead of print] Review. PubMed PMID: 33588062.
Tanner JJ, Johnson AJ, Terry EL, Cardoso J, Garvan C, Staud R, Deutsch G, Deshpande H, Lai S, Addison A, Redden D, Goodin BR, Price CC, Fillingim RB (CPS), Sibille KT. Resilience, pain, and the brain: Relationships differ by sociodemographics. J Neurosci Res. 2021 Feb 19. doi: 10.1002/jnr.24790. [Epub ahead of print] PubMed PMID: 33606287.
Salloum RG, LeLaurin JH, Dallery J, Childs K, Huo J, Shenkman EA, Warren GW. Cost evaluation of tobacco control interventions in clinical settings: A systematic review. Prev Med. 2021 Feb 24:106469. doi: 10.1016/j.ypmed.2021.106469. [Epub ahead of print] Review. PubMed PMID: 33639182.
Carter LM, Ocampo Ramos JC, Bolch WE, Lewis JS, Kesner AL. Technical Note: Patient-morphed mesh-type phantoms to support personalized nuclear medicine dosimetry – a proof of concept study. Med Phys. 2021 Feb 17. doi: 10.1002/mp.14784. [Epub ahead of print] PubMed PMID: 33595863.
Khalil GE, Jones EC, Fujimoto K. Examining proximity exposure in a social network as a mechanism driving peer influence of adolescent smoking. Addict Behav. 2021 Feb 4;117:106853. doi: 10.1016/j.addbeh.2021.106853. [Epub ahead of print] PubMed PMID: 33578104.
Prosperi M, Guo Y, Bian J. Bagged random causal networks for interventional queries on observational biomedical datasets. J Biomed Inform. 2021 Feb 4;115:103689. doi: 10.1016/j.jbi.2021.103689. [Epub ahead of print] PubMed PMID: 33548542.
Ghosh S, Bian J, Guo Y, Prosperi M. Deep propensity network using a sparse autoencoder for estimation of treatment effects. J Am Med Inform Assoc. 2021 Feb 16. pii: ocaa346. doi: 10.1093/jamia/ocaa346. [Epub ahead of print] PubMed PMID: 33594415.
Salloum RG, LeLaurin JH, Lee JH, Lafata JE, Williams M, Wang Y, Smith JM, Staras SAS, Strayer SM, Thrasher JF. Primary Care Physician Perspectives on Recommending E-cigarettes to Smokers: a Best-Worst Discrete Choice Experiment. J Gen Intern Med. 2021 Feb 1. doi: 10.1007/s11606-021-06615-w. [Epub ahead of print] PubMed PMID: 33523343.
Gu T, Zhao X, Barbazuk WB, Lee JH. miTAR: a hybrid deep learning-based approach for predicting miRNA targets. BMC Bioinformatics. 2021 Feb 27;22(1):96. doi: 10.1186/s12859-021-04026-6. PubMed PMID: 33639834.
Indelicato DJ, Bates JE, Mailhot Vega RB, Rotondo RL, Hoppe BS, Morris CG, Looi WS, Sandler ES, Aldana PR, Bradley JA. Second tumor risk in children treated with proton therapy. Pediatr Blood Cancer. 2021 Feb 9:e28941. doi: 10.1002/pbc.28941. [Epub ahead of print] PubMed PMID: 33565257.
Rodrigues-Fernandes CI, Migliorati CA, Gueiros LAM, de Lima Morais TM, Vargas PA, de Almeida OP, Lopes MA, Santos-Silva AR. Adalimumab-induced sarcoidosis-like reaction involving oral cavity in rheumatoid arthritis: a case-based review. Clin Rheumatol. 2021 Feb 24. doi: 10.1007/s10067-021-05654-2. [Epub ahead of print] Review. PubMed PMID: 33629203.
Samuels V, Schoppee TM, Greenlee A, Gordon D, Jean S, Smith V, Reed T, Kittelson S, Quest T, O’Mahony S, Hauser J, Guay MOD, Rabow MW, Emanuel L, Fitchett G, Handzo G, Chochinov HM, Yao Y, Wilkie DJ. Interim Analysis of Attrition Rates in Palliative Care Study on Dignity Therapy. Am J Hosp Palliat Care. 2021 Feb 9:1049909121994309. doi: 10.1177/1049909121994309. [Epub ahead of print] PubMed PMID: 33557587.
Zou B, Mi X, Tighe PJ, Koch GG, Zou F. On kernel machine learning for propensity score estimation under complex confounding structures. Pharm Stat. 2021 Feb 22. doi: 10.1002/pst.2105. [Epub ahead of print] PubMed PMID: 33619894.
Dillard JR, Newsome FA, Kelly AS, Gross AC, Morgan-Daniel J, Adkins LE, Madem SS, Cardel MI. The Effects of Anti-obesity Pharmacotherapy Interventions on Psychosocial Factors Among Adolescents with Obesity: a Scoping Review. Curr Nutr Rep. 2021 Feb 13. doi: 10.1007/s13668-021-00351-7. [Epub ahead of print] Review. PubMed PMID: 33580872.
Haneuse S, Arterburn D, Daniels MJ. Assessing Missing Data Assumptions in EHR-Based Studies: A Complex and Underappreciated Task. JAMA Netw Open. 2021 Feb 1;4(2):e210184. doi: 10.1001/jamanetworkopen.2021.0184. PubMed PMID: 33635321.
Cancer Therapeutics & Host Response
Vapiwala N, Wong JK, Handorf E, Paly J, Grewal A, Tendulkar R, Godfrey D, Carpenter D, Mendenhall NP, Henderson RH, Stish BJ, Vargas C, Salama JK, Davis BJ, Horwitz EM. A Pooled Toxicity Analysis of Moderately Hypofractionated Proton Beam Therapy and Intensity Modulated Radiation Therapy in Early-Stage Prostate Cancer Patients. Int J Radiat Oncol Biol Phys. 2021 Feb 1. pii: S0360-3016(21)00117-6. doi: 10.1016/j.ijrobp.2021.01.043. [Epub ahead of print] PubMed PMID: 33539968.
Neyroud D, Nosacka RL, Callaway CS, Trevino JG, Hu H, Judge SM, Judge AR. FoxP1 is a transcriptional repressor associated with cancer cachexia that induces skeletal muscle wasting and weakness. J Cachexia Sarcopenia Muscle. 2021 Feb 1. doi: 10.1002/jcsm.12666. [Epub ahead of print] PubMed PMID: 33527776.
Wang T, Townsend MK, Vinci C, Jake-Schoffman DE, Tworoger SS. Early life exposure to tobacco smoke and ovarian cancer risk in adulthood. Int J Epidemiol. 2021 Feb 27. pii: dyab018. doi: 10.1093/ije/dyab018. [Epub ahead of print] PubMed PMID: 33647961.
Tanner JJ, Johnson AJ, Terry EL, Cardoso J, Garvan C, Staud R, Deutsch G, Deshpande H, Lai S, Addison A, Redden D, Goodin BR, Price CC, Fillingim RB (CPS), Sibille KT. Resilience, pain, and the brain: Relationships differ by sociodemographics. J Neurosci Res. 2021 Feb 19. doi: 10.1002/jnr.24790. [Epub ahead of print] PubMed PMID: 33606287.
Indelicato DJ, Bates JE, Mailhot Vega RB, Rotondo RL, Hoppe BS, Morris CG, Looi WS, Sandler ES, Aldana PR, Bradley JA. Second tumor risk in children treated with proton therapy. Pediatr Blood Cancer. 2021 Feb 9:e28941. doi: 10.1002/pbc.28941. [Epub ahead of print] PubMed PMID: 33565257.
Kolb R, De U, Khan S, Luo Y, Kim MC, Yu H, Wu C, Mo J, Zhang X, Zhang P, Zhang X, Borcherding N, Koppel D, Fu YX, Zheng SG, Avram D, Zheng G, Zhou D, Zhang W. Proteolysis-targeting chimera against BCL-X(L) destroys tumor-infiltrating regulatory T cells. Nat Commun. 2021 Feb 24;12(1):1281. doi: 10.1038/s41467-021-21573-x. PubMed PMID: 33627663.
Cascio MJ, Whitley EM, Sahay B, Cortes-Hinojosa G, Chang LJ, Cowart J, Salute M, Sayour E, Dark M, Sandoval Z, Mitchell DA, Milner RJ. Canine osteosarcoma checkpoint expression correlates with metastasis and T-cell infiltrate. Vet Immunol Immunopathol. 2021 Feb;232:110169. doi: 10.1016/j.vetimm.2020.110169. Epub 2020 Dec 15. PubMed PMID: 33387703.
Yu Q, Jobin C, Thomas RM. Implications of the microbiome in the development and treatment of pancreatic cancer: Thinking outside of the box by looking inside the gut. Neoplasia. 2021 Feb;23(2):246-256. doi: 10.1016/j.neo.2020.12.008. Epub 2021 Jan 6. Review. PubMed PMID: 33418277; PubMed Central PMCID: PMC7804346.
Brown PA, Kairalla JA, Hilden JM, Dreyer ZE, Carroll AJ, Heerema NA, Wang C, Devidas M, Gore L, Salzer WL, Winick NJ, Carroll WL, Raetz EA, Borowitz MJ, Small D, Loh ML, Hunger SP. FLT3 inhibitor lestaurtinib plus chemotherapy for newly diagnosed KMT2A-rearranged infant acute lymphoblastic leukemia: Children’s Oncology Group trial AALL0631. Leukemia. 2021 Feb 23. doi: 10.1038/s41375-021-01177-6. [Epub ahead of print] PubMed PMID: 33623141.
De Leo AN, Holtzman AL, Ho MW, Morris CG, Rutenberg MS, Rotondo RL, Bates JE, Indelicato DJ, Rao D, Asa Hasan M, Mendenhall WM. Vision loss following high-dose proton-based radiotherapy for skull-base chordoma and chondrosarcoma. Radiother Oncol. 2021 Feb 18. pii: S0167-8140(21)06072-2. doi: 10.1016/j.radonc.2021.02.012. [Epub ahead of print] PubMed PMID: 33610625.
Kopparthy P, Chaffin J, Feely MM, Parekh HD. HPV-16-associated lymphoepithelial-like carcinoma mimicking rectal tonsil. Clin J Gastroenterol. 2021 Feb 19. doi: 10.1007/s12328-021-01362-1. [Epub ahead of print] PubMed PMID: 33608809.
Ng WT, Soong YL, Chan Ahn Y, AlHussain H, Choi HCW, Corry J, Grégoire V, Harrington KJ, Hu CS, Jensen K, Kwong DL, Langendijk JA, Le QT, Lee NY, Lin JC, Lu TX, Mendenhall WM, O’Sullivan B, Ozyar E, Pan JJ, Peters LJ, Poh SS, Rosenthal DI, Sanguineti G, Tao Y, Wee JT, Yom SS, Chua MLK, Lee AWM. International Recommendations on Re-irradiation by Intensity-modulated Radiotherapy for Locally Recurrent Nasopharyngeal Carcinoma. Int J Radiat Oncol Biol Phys. 2021 Feb 2. pii: S0360-3016(21)00115-2. doi: 10.1016/j.ijrobp.2021.01.041. [Epub ahead of print] Review. PubMed PMID: 33571626.
Kennedy AL, Myers KC, Bowman J, Gibson CJ, Camarda ND, Furutani E, Muscato GM, Klein RH, Ballotti K, Liu S, Harris CE, Galvin A, Malsch M, Dale D, Gansner JM, Nakano TA, Bertuch A, Vlachos A, Lipton JM, Castillo P, Connelly J, Churpek J, Edwards JR, Hijiya N, Ho RH, Hofmann I, Huang JN, Keel S, Lamble A, Lau BW, Norkin M, Stieglitz E, Stock W, Walkovich K, Boettcher S, Brendel C, Fleming MD, Davies SM, Weller EA, Bahl C, Carter SL, Shimamura A, Lindsley RC. Distinct genetic pathways define pre-malignant versus compensatory clonal hematopoiesis in Shwachman-Diamond syndrome. Nat Commun. 2021 Feb 26;12(1):1334. doi: 10.1038/s41467-021-21588-4. PubMed PMID: 33637765.
Smith SM, Wachter K, Burris HA 3rd, Schilsky RL, George DJ, Peterson DE, Johnson ML, Markham MJ, Mileham KF, Beg MS, Bendell JC, Dreicer R, Keedy VL, Kimple RJ, Knoll MA, LoConte N, MacKay H, Meisel JL, Moynihan TJ, Mulrooney DA, Mulvey TM, Odenike O, Pennell NA, Reeder-Hayes K, Smith C, Sullivan RJ, Uzzo R. Clinical Cancer Advances 2021: ASCO’s Report on Progress Against Cancer. J Clin Oncol. 2021 Feb 2:JCO2003420. doi: 10.1200/JCO.20.03420. [Epub ahead of print] PubMed PMID: 33527845.
Fangusaro J, Onar-Thomas A, Poussaint TY, Wu S, Ligon AH, Lindeman N, Campagne O, Banerjee A, Gururangan S, Kilburn L, Goldman S, Qaddoumi I, Baxter P, Vezina G, Bregman C, Patay Z, Jones JY, Stewart CF, Fisher MJ, Doyle LA, Smith M, Dunkel IJ, Fouladi M. A Phase 2 Trial of Selumetinib in Children with Recurrent Optic Pathway and Hypothalamic Low-Grade Glioma without NF1: A Pediatric Brain Tumor Consortium Study. Neuro Oncol. 2021 Feb 25. pii: noab047. doi: 10.1093/neuonc/noab047. [Epub ahead of print] PubMed PMID: 33631016.
Zhu H, Klement JD, Lu C, Redd PS, Yang D, Smith AD, Poschel DB, Zou J, Liu D, Wang PG, Ostrov D, Coant N, Hannun YA, Colby AH, Grinstaff MW, Liu K. Asah2 Represses the p53-Hmox1 Axis to Protect Myeloid-Derived Suppressor Cells from Ferroptosis. J Immunol. 2021 Feb 5. pii: ji2000500. doi: 10.4049/jimmunol.2000500. [Epub ahead of print] PubMed PMID: 33547170.
Gomez NF, Still MA, Akki AS, Carbajal-Mamani SL, Cardenas-Goicoechea J. Uterine clear cell carcinoma arising from cystic adenomyosis: a case report. J Obstet Gynaecol. 2021 Feb 22:1-4. doi: 10.1080/01443615.2020.1847056. [Epub ahead of print] PubMed PMID: 33616463.
Draganov PV, Aihara H, Karasik MS, Ngamruengphong S, Aadam AA, Othman MO, Sharma N, Grimm IS, Rostom A, Elmunzer BJ, Jawaid SA, Westerveld D, Perbtani YB, Hoffman BJ, Schlachterman A, Siegel A, Coman RM, Wang AY, Yang D. Endoscopic Submucosal Dissection (ESD) in North America: A Large Prospective Multicenter Study. Gastroenterology. 2021 Feb 18. pii: S0016-5085(21)00424-8. doi: 10.1053/j.gastro.2021.02.036. [Epub ahead of print] PubMed PMID: 33610532.
Wilson LJ, Pirlepesov F, Moskvin V, Li Z, Guo Y, Li Y, Merchant TE, Faught AM. Proton therapy delivery method affects dose-averaged linear energy transfer in patients. Phys Med Biol. 2021 Feb 19. doi: 10.1088/1361-6560/abe835. [Epub ahead of print] PubMed PMID: 33607632.
Bader CS, Jin L, Levy RB. STING and Transplantation: Can targeting this pathway improve outcomes? Blood. 2021 Feb 22. pii: blood.2020008911. doi: 10.1182/blood.2020008911. [Epub ahead of print] PubMed PMID: 33619537.
Zhang S, Ohland C, Jobin C, Sang S. Black Tea Theaflavin Detoxifies Metabolic Toxins in the Intestinal Tract of Mice. Mol Nutr Food Res. 2021 Feb;65(4):e2000887. doi: 10.1002/mnfr.202000887. Epub 2021 Jan 12. PubMed PMID: 33381889.
Burke M, Pal P, Zhang P, Zhang X, Zheng G. Concise Synthesis of (S)-δ-CEHC, a Metabolite of Vitamin E. ACS Omega. 2021 Feb 2;6(6):4355-4361. doi: 10.1021/acsomega.0c05658. eCollection 2021 Feb 16. PubMed PMID: 33623846; PubMed Central PMCID: PMC7893788.
Yan H, Li Y, Cheng S, Zeng Y. Advances in Analytical Technologies for Extracellular Vesicles. Anal Chem. 2021 Feb 26. doi: 10.1021/acs.analchem.1c00693. [Epub ahead of print] PubMed PMID: 33635060.
Sadrameli SS, Chan TM, Vaziri S, Murad GJA, Hooten KG. Patient-Reported Outcomes: Quality of Care on a Neurosurgical Ward. Qual Manag Health Care. 2021 Feb 11. doi: 10.1097/QMH.0000000000000284. [Epub ahead of print] PubMed PMID: 33591084.
Mechanisms of Oncogenesis
Gay LA, Stribling D, Turner PC, Renne R. Kaposi’s Sarcoma-associated Herpesvirus microRNA mutants modulate cancer hallmark phenotypic differences in human endothelial cells. J Virol. 2021 Feb 10. pii: JVI.02022-20. doi: 10.1128/JVI.02022-20. [Epub ahead of print] PubMed PMID: 33568509.
Kolb R, De U, Khan S, Luo Y, Kim MC, Yu H, Wu C, Mo J, Zhang X, Zhang P, Zhang X, Borcherding N, Koppel D, Fu YX, Zheng SG, Avram D, Zheng G, Zhou D, Zhang W. Proteolysis-targeting chimera against BCL-X(L) destroys tumor-infiltrating regulatory T cells. Nat Commun. 2021 Feb 24;12(1):1281. doi: 10.1038/s41467-021-21573-x. PubMed PMID: 33627663.
Mboge MY, Combs J, Singh S, Andring J, Wolff A, Tu C, Zhang Z, McKenna R, Frost SC. Inhibition of Carbonic Anhydrase Using SLC-149: Support for a Noncatalytic Function of CAIX in Breast Cancer. J Med Chem. 2021 Feb 11;64(3):1713-1724. doi: 10.1021/acs.jmedchem.0c02077. Epub 2021 Feb 1. PubMed PMID: 33523653.
Vahabi N, Salehi M, Duarte JD, Mollalo A, Michailidis G. County-level longitudinal clustering of COVID-19 mortality to incidence ratio in the United States. Sci Rep. 2021 Feb 4;11(1):3088. doi: 10.1038/s41598-021-82384-0. PubMed PMID: 33542313; PubMed Central PMCID: PMC7862666.
Mendelson AA, Lam F, Peirce SM, Murfee WL. Clinical Perspectives on the Microcirculation. Microcirculation. 2021 Feb 24:e12688. doi: 10.1111/micc.12688. [Epub ahead of print] Review. PubMed PMID: 33629399.
Gurumurthy A, Yu DT, Stees JR, Chamales P, Gavrilova E, Wassel P, Li L, Stribling D, Chen J, Brackett M, Ishov AM, Xie M, Bungert J. Super-enhancer mediated regulation of adult β-globin gene expression: the role of eRNA and Integrator. Nucleic Acids Res. 2021 Feb 22;49(3):1383-1396. doi: 10.1093/nar/gkab002. PubMed PMID: 33476375; PubMed Central PMCID: PMC7897481.
Kamble P, Hall K, Chandak M, Tang Q, Çağlayan M. DNA ligase I fidelity mediates the mutagenic ligation of pol β oxidized and mismatch nucleotide insertion products in base excision repair. J Biol Chem. 2021 Feb 15:100427. doi: 10.1016/j.jbc.2021.100427. [Epub ahead of print] PubMed PMID: 33600799.
Aqel SI, Yang X, Kraus EE, Song J, Farinas MF, Zhao EY, Pei W, Lovett-Racke AE, Racke MK, Li C, Yang Y. A STAT3 inhibitor ameliorates CNS autoimmunity by restoring Teff:Treg balance. JCI Insight. 2021 Feb 22;6(4). pii: 142376. doi: 10.1172/jci.insight.142376. PubMed PMID: 33411696.
Nguyen LT, Gurijala J, Rananaware SR, Pizzano BLM, Stone BT, Jain PK. CRISPR-ENHANCE: An enhanced nucleic acid detection platform using Cas12a. Methods. 2021 Feb 9. pii: S1046-2023(21)00025-6. doi: 10.1016/j.ymeth.2021.02.001. [Epub ahead of print] PubMed PMID: 33577982.
Sheng Y, Yang G, Casey K, Curry S, Oliver M, Han SM, Leeuwenburgh C, Xiao R. A novel role of the mitochondrial iron-sulfur cluster assembly protein ISCU-1/ISCU in longevity and stress response. Geroscience. 2021 Feb 1. doi: 10.1007/s11357-021-00327-z. [Epub ahead of print] PubMed PMID: 33527323.
