Publications
Recent + Selected
Recent Selected Publications
Cancer Control & Population Sciences
Zhang D, Tailor TD, Kim C, B Atkins M, Braithwaite D, Akinyemiju T. Immunotherapy Utilization Among Patients With Metastatic NSCLC: Impact of Comorbidities. J Immunother. 2021 Mar 22. doi: 10.1097/CJI.0000000000000366. [Epub ahead of print] PubMed PMID: 33758148.
Grajo JR, Batra NV, Bozorgmehri S, Magnelli LL, Pavlinec J, O’Malley P, Su LM, Crispen PL. Validation of aorta-lesion-attenuation difference on preoperative contrast-enhanced computed tomography scan to differentiate between malignant and benign oncocytic renal tumors. Abdom Radiol (NY). 2021 Mar 4. doi: 10.1007/s00261-021-02971-7. [Epub ahead of print] PubMed PMID: 33665734.
Stack BC Jr, Twining C, Rastatter J, Angelos P, Baloch Z, Diercks G, Faquin W, Kazahaya K, Rivkees S, Sheyn T, Shin JJ, Smith J, Thompson G, Viswanathan P, Wassner A, Brooks J, Randolph GW. Consensus Statement by the American Association of Clinical Endocrinology (AACE) and the American Head and Neck Society Endocrine Surgery Section (AHNS) on Pediatric Benign and Malignant Thyroid Surgery. Endocr Pract. 2021 Mar;27(3):174-184. doi: 10.1016/j.eprac.2020.12.001. Epub 2020 Dec 10. PubMed PMID: 33779552.
Luo J, Kroenke CH, Hendryx M, Shadyab AH, Liu N, Chen X, Wang F, Thomas F, Saquib N, Qi L, Cheng TD, Arthur R, Wactawski-Wende J. Mediation analysis of racial disparities in triple-negative breast cancer incidence among postmenopausal women. Breast Cancer Res Treat. 2021 Mar 7. doi: 10.1007/s10549-021-06158-y. [Epub ahead of print] PubMed PMID: 33677722.
Cruz-Monserrate Z, Gumpper K, Pita V, Hart PA, Forsmark C, Whitcomb DC, Yadav D, Waldron RT, Pandol S, Steen H, Anani V, Kanwar N, Vege SS, Appana S, Li L, Serrano J, Rinaudo JAS, Topazian M, Conwell DL; Consortium for the Study of Chronic Pancreatitis, Diabetes, and Pancreatic Cancer. Biomarkers of Chronic Pancreatitis: A systematic literature review. Pancreatology. 2021 Mar;21(2):323-333. doi: 10.1016/j.pan.2021.01.006. Epub 2021 Jan 22. PubMed PMID: 33558189; PubMed Central PMCID: PMC7969447.
Cardoso J, Apagueno B, Lysne P, Hoyos L, Porges E, Riley JL, Fillingim RB, Woods AJ, Cohen R, Cruz-Almeida Y. Pain and the Montreal Cognitive Assessment (MoCA) in Aging. Pain Med. 2021 Mar 15. pii: pnab003. doi: 10.1093/pm/pnab003. [Epub ahead of print] PubMed PMID: 33718961.
Judge MKM, Luedke R, Dyal BW, Ezenwa MO, Wilkie DJ. Clinical efficacy and implementation issues of an electronic pain reporting device among outpatients with cancer. Support Care Cancer. 2021 Mar 1. doi: 10.1007/s00520-021-06075-2. [Epub ahead of print] PubMed PMID: 33646365.
Dolin RH, Gothi SR, Boxwala A, Heale BSE, Husami A, Jones J, Khangar H, Londhe S, Naeymi-Rad F, Rao S, Rapchak B, Shalaby J, Suraj V, Xie N, Chamala S, Alterovitz G. vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration. BMC Bioinformatics. 2021 Mar 2;22(1):104. doi: 10.1186/s12859-021-04039-1. PubMed PMID: 33653260; PubMed Central PMCID: PMC7923512.
O’Mahony S, Kittelson S, Barker PC, Guay MOD, Yao Y, Handzo GF, Chochinov HM, Fitchett G, Emanuel LL, Wilkie DJ. Association of Race with End-of-Life Treatment Preferences in Older Adults with Cancer Receiving Outpatient Palliative Care. J Palliat Med. 2021 Mar 23. doi: 10.1089/jpm.2020.0542. [Epub ahead of print] PubMed PMID: 33760658.
Yaghjyan L, Mai V, Wang X, Ukhanova M, Tagliamonte M, Martinez YC, Rich SN, Egan KM. Gut microbiome, body weight, and mammographic breast density in healthy postmenopausal women. Cancer Causes Control. 2021 Mar 27. doi: 10.1007/s10552-021-01420-6. [Epub ahead of print] PubMed PMID: 33772705.
Koopaei NN, Chowdhury EA, Jiang J, Noorani B, da Silva L, Bulut G, Hakimjavadi H, Chamala S, Bickel U, Schmittgen TD. Enrichment of the erythrocyte miR-451a in brain extracellular vesicles following impairment of the blood-brain barrier. Neurosci Lett. 2021 Mar 13;751:135829. doi: 10.1016/j.neulet.2021.135829. [Epub ahead of print] PubMed PMID: 33727125.
Hutto B, Saunders RP, Wilcox S, Jake-Schoffman DE, Bernhart JA, Dunn CG, Kaczynski AT, James KL. Pathways of influences leading to adoption of the Faith, Activity and Nutrition (FAN) program in a statewide initiative. Eval Program Plann. 2021 Mar 16;87:101941. doi: 10.1016/j.evalprogplan.2021.101941. [Epub ahead of print] PubMed PMID: 33773182.
Mendenhall WM, Holtzman AL, Dagan R, Bryant CM, Hitchcock KE, Amdur RJ, Fernandes RP. Current Role of Radiotherapy in the Management of Oral Cavity Squamous Cell Carcinoma. Craniomaxillofac Trauma Reconstr. 2021 Mar;14(1):79-83. doi: 10.1177/1943387520971418. Epub 2020 Nov 3. Review. PubMed PMID: 33613841; PubMed Central PMCID: PMC7868505.
Waheed N, Fradley MG, DeRemer DL, Mahmoud A, Shah CP, Langaee TY, Lipori GP, March K, Pepine CJ, Cooper-DeHoff RM, Wu Y, Gong Y. Newly diagnosed cardiovascular disease in patients treated with immune checkpoint inhibitors: a retrospective analysis of patients at an academic tertiary care center. Cardiooncology. 2021 Mar 18;7(1):10. doi: 10.1186/s40959-021-00097-9. PubMed PMID: 33736707; PubMed Central PMCID: PMC7977591.
Cornell RF, Fraser R, Costa L, Goodman S, Estrada-Merly N, Lee C, Hildebrandt G, Gergis U, Farhadfar N, Freytes CO, Kamble RT, Krem M, Kyle RA, Lazarus HM, Marks DI, Meehan K, Patel SS, Ramanathan M, Olsson RF, Wagner JL, Kumar S, Qazilbash MH, Shah N, Hari P, D’Souza A. Bortezomib-Based Induction Is Associated with Superior Outcomes in Light Chain Amyloidosis Patients Treated with Autologous Hematopoietic Cell Transplantation Regardless of Plasma Cell Burden. Transplant Cell Ther. 2021 Mar;27(3):264.e1-264.e7. doi: 10.1016/j.jtct.2020.11.018. Epub 2020 Dec 16. PubMed PMID: 33781533.
Farhadfar N, Gharaibeh RZ, Lyon D, Whitlock JA, Murthy HS, Weaver MT, Wang GP, Jobin C, Wingard JR, Kelly DL. Microbiota phylogenic analysis revealed decreased abundance of Faecalibacterium prausnitzii, an anti-inflammatory commensal bacterium, in patients with chronic graft-versus-host disease. Hematol Oncol Stem Cell Ther. 2021 Mar 19. pii: S1658-3876(21)00033-9. doi: 10.1016/j.hemonc.2021.03.004. [Epub ahead of print] PubMed PMID: 33785388.

Cancer Therapeutics & Host Response
Grajo JR, Batra NV, Bozorgmehri S, Magnelli LL, Pavlinec J, O’Malley P, Su LM, Crispen PL. Validation of aorta-lesion-attenuation difference on preoperative contrast-enhanced computed tomography scan to differentiate between malignant and benign oncocytic renal tumors. Abdom Radiol (NY). 2021 Mar 4. doi: 10.1007/s00261-021-02971-7. [Epub ahead of print] PubMed PMID: 33665734.
Mendenhall WM, Holtzman AL, Dagan R, Bryant CM, Hitchcock KE, Amdur RJ, Fernandes RP. Current Role of Radiotherapy in the Management of Oral Cavity Squamous Cell Carcinoma. Craniomaxillofac Trauma Reconstr. 2021 Mar;14(1):79-83. doi: 10.1177/1943387520971418. Epub 2020 Nov 3. Review. PubMed PMID: 33613841; PubMed Central PMCID: PMC7868505.
Waheed N, Fradley MG, DeRemer DL, Mahmoud A, Shah CP, Langaee TY, Lipori GP, March K, Pepine CJ, Cooper-DeHoff RM, Wu Y, Gong Y. Newly diagnosed cardiovascular disease in patients treated with immune checkpoint inhibitors: a retrospective analysis of patients at an academic tertiary care center. Cardiooncology. 2021 Mar 18;7(1):10. doi: 10.1186/s40959-021-00097-9. PubMed PMID: 33736707; PubMed Central PMCID: PMC7977591.
Farhadfar N, Gharaibeh RZ, Lyon D, Whitlock JA, Murthy HS, Weaver MT, Wang GP, Jobin C, Wingard JR, Kelly DL. Microbiota phylogenic analysis revealed decreased abundance of Faecalibacterium prausnitzii, an anti-inflammatory commensal bacterium, in patients with chronic graft-versus-host disease. Hematol Oncol Stem Cell Ther. 2021 Mar 19. pii: S1658-3876(21)00033-9. doi: 10.1016/j.hemonc.2021.03.004. [Epub ahead of print] PubMed PMID: 33785388.
Matthew S, Chen QY, Ratnayake R, Fermaintt CS, Lucena-Agell D, Bonato F, Prota AE, Lim ST, Wang X, Díaz JF, Risinger AL, Paul VJ, Oliva MÁ, Luesch H. Gatorbulin-1, a distinct cyclodepsipeptide chemotype, targets a seventh tubulin pharmacological site. Proc Natl Acad Sci U S A. 2021 Mar 2;118(9). pii: e2021847118. doi: 10.1073/pnas.2021847118. PubMed PMID: 33619102; PubMed Central PMCID: PMC7936326.
Ramnaraign BH, Chatzkel JA, Al-Mansour ZA, Rogers S, Jones D, DeRemer D, George TJ. Immunotherapy Management in Special Cancer Patient Populations. JCO Oncol Pract. 2021 Mar 12:OP2000996. doi: 10.1200/OP.20.00996. [Epub ahead of print] PubMed PMID: 33710933.
Goldsmith SR, Abid MB, Auletta JJ, Bashey A, Beitinjaneh A, Castillo P, Chemaly RF, Chen M, Ciurea SO, Dandoy CE, Angel Diaz M, Fuchs EJ, Ganguly S, Kanakry CG, Kanakry JA, Kim S, Komanduri K, Krem M, Lazarus HM, Liu H, Ljungman P, Maziarz RT, Mulroney C, Nathan S, Nishihori T, Page KM, Perales MA, Taplitz RA, Romee R, Riches M. Post-Transplant Cyclophosphamide (PTCy) is Associated with Increased Cytomegalovirus Infection: A CIBMTR Analysis. Blood. 2021 Mar 3. pii: blood.2020009362. doi: 10.1182/blood.2020009362. [Epub ahead of print] PubMed PMID: 33657221.
Holmes TD, Pandey RV, Helm EY, Schlums H, Han H, Campbell TM, Drashansky TT, Chiang S, Wu CY, Tao C, Shoukier M, Tolosa E, Von Hardenberg S, Sun M, Klemann C, Marsh RA, Lau CM, Lin Y, Sun JC, Månsson R, Cichocki F, Avram D, Bryceson YT. The transcription factor Bcl11b promotes both canonical and adaptive NK cell differentiation. Sci Immunol. 2021 Mar 12;6(57). pii: eabc9801. doi: 10.1126/sciimmunol.abc9801. PubMed PMID: 33712472.
White PL, Bretagne S, Caliendo AM, Loeffler J, Patterson TF, Slavin M, Wingard JR. Aspergillus Polymerase Chain Reaction-An Update on Technical Recommendations, Clinical Applications, and Justification for Inclusion in the Second Revision of the EORTC/MSGERC Definitions of Invasive Fungal Disease. Clin Infect Dis. 2021 Mar 12;72(Supplement_2):S95-S101. doi: 10.1093/cid/ciaa1865. PubMed PMID: 33709129.
Upadhyaya SA, Robinson G, Onar-Thomas A, Orr BA, Johann P, Wu G, Billups CA, Tatevossian RG, Dhanda SK, Srinivasan A, Broniscer A, Qaddoumi I, Vinitsky A, Armstrong GT, Bendel A, Hassall TE, Partap S, Fisher PG, Crawford JR, Chintagumpala MM, Bouffet E, Gururangan S, Mostafavi R, Sanders RP, Klimo P, Patay Z, Indelicato DJ, Nichols KE, Boop FA, Merchant TE, Kool M, Ellison DW, Gajjar A. Relevance of Molecular Groups in Children with Newly Diagnosed Atypical Teratoid Rhabdoid Tumor: Results from Prospective St. Jude Multi-Institutional Trials. Clin Cancer Res. 2021 Mar 18. pii: clincanres.4731.2020. doi: 10.1158/1078-0432.CCR-20-4731. [Epub ahead of print] PubMed PMID: 33737307.
Purayil HT, Zhang Y, Black JB, Gharaibeh R, Daaka Y. Nuclear βArrestin1 regulates androgen receptor function in castration resistant prostate cancer. Oncogene. 2021 Mar 10. doi: 10.1038/s41388-021-01730-8. [Epub ahead of print] PubMed PMID: 33692468.
Wang P, Zhang S, Yerke A, Ohland CL, Gharaibeh RZ, Fouladi F, Fodor AA, Jobin C, Sang S. Avenanthramide Metabotype from Whole-Grain Oat Intake is Influenced by Faecalibacterium prausnitzii in Healthy Adults. J Nutr. 2021 Mar 9. pii: nxab006. doi: 10.1093/jn/nxab006. [Epub ahead of print] PubMed PMID: 33694368.
Looi WS, Indelicato DJ, Rutenberg MS. The Role of Radiation Therapy for Symptomatic Desmoid Tumors. Curr Treat Options Oncol. 2021 Mar 1;22(4):34. doi: 10.1007/s11864-021-00831-6. Review. PubMed PMID: 33649873.
Ng WT, Tsang RKY, Beitler JJ, de Bree R, Coca-Pelaz A, Eisbruch A, Guntinas-Lichius O, Lee AWM, Mäkitie AA, Mendenhall WM, Nuyts S, Rinaldo A, Robbins KT, Rodrigo JP, Silver CE, Simo R, Smee R, Strojan P, Takes RP, Ferlito A. Contemporary management of the neck in nasopharyngeal carcinoma. Head Neck. 2021 Mar 29. doi: 10.1002/hed.26685. [Epub ahead of print] Review. PubMed PMID: 33780074.
Bryant AJ, Pham A, Gogoi H, Mitchell CR, Pais F, Jin L. The Third Man: DNA sensing as espionage in pulmonary vascular health and disease. Pulm Circ. 2021 Mar 2;11(1):2045894021996574. doi: 10.1177/2045894021996574. eCollection 2021 Jan-Mar. Review. PubMed PMID: 33738095; PubMed Central PMCID: PMC7934053.
Svoboda SA, Huang S, Liu X, Hsu S, Motaparthi K. Paraneoplastic pemphigus: revised diagnostic criteria based on literature analysis. J Cutan Pathol. 2021 Mar 14. doi: 10.1111/cup.14004. [Epub ahead of print] PubMed PMID: 33719070.
Starr JS, Skelton WP 4th, Rahmanian KP, Guenther R, Allen WL, George TJ, Moseley RE. Systematic Analysis of Extracting Data on Advance Directives from Patient Electronic Health Records (EHR) in Terminal Oncology Patients. J Palliat Care. 2021 Mar 12:8258597211001153. doi: 10.1177/08258597211001153. [Epub ahead of print] PubMed PMID: 33711237.
Mendenhall WM, Holtzman AL, Dagan R, Bryant CM, Hitchcock KE, Amdur RJ, Fernandes RP. Current Role of Radiotherapy in the Management of Oral Cavity Squamous Cell Carcinoma. Craniomaxillofac Trauma Reconstr. 2021 Mar;14(1):79-83. doi: 10.1177/1943387520971418. Epub 2020 Nov 3. Review. PubMed PMID: 33613841; PubMed Central PMCID: PMC7868505.
Kaneko Y, Hatano R, Hirota N, Isambert N, Trillet-Lenoir V, You B, Alexandre J, Zalcman G, Valleix F, Podoll T, Umezawa Y, Takao S, Iwata S, Hosono O, Taguchi T, Yamada T, Dang NH, Ohnuma K, Angevin E, Morimoto C. Serum soluble CD26/DPP4 titer variation is a potential prognostic biomarker in cancer therapy with a humanized anti-CD26 antibody. Biomark Res. 2021 Mar 23;9(1):21. doi: 10.1186/s40364-021-00273-0. PubMed PMID: 33757558; PubMed Central PMCID: PMC7989014.

Mechanisms of Oncogenesis
Koopaei NN, Chowdhury EA, Jiang J, Noorani B, da Silva L, Bulut G, Hakimjavadi H, Chamala S, Bickel U, Schmittgen TD. Enrichment of the erythrocyte miR-451a in brain extracellular vesicles following impairment of the blood-brain barrier. Neurosci Lett. 2021 Mar 13;751:135829. doi: 10.1016/j.neulet.2021.135829. [Epub ahead of print] PubMed PMID: 33727125.
Farhadfar N, Gharaibeh RZ, Lyon D, Whitlock JA, Murthy HS, Weaver MT, Wang GP, Jobin C, Wingard JR, Kelly DL. Microbiota phylogenic analysis revealed decreased abundance of Faecalibacterium prausnitzii, an anti-inflammatory commensal bacterium, in patients with chronic graft-versus-host disease. Hematol Oncol Stem Cell Ther. 2021 Mar 19. pii: S1658-3876(21)00033-9. doi: 10.1016/j.hemonc.2021.03.004. [Epub ahead of print] PubMed PMID: 33785388.
Purayil HT, Zhang Y, Black JB, Gharaibeh R, Daaka Y. Nuclear βArrestin1 regulates androgen receptor function in castration resistant prostate cancer. Oncogene. 2021 Mar 10. doi: 10.1038/s41388-021-01730-8. [Epub ahead of print] PubMed PMID: 33692468.
Zhu G, Luo H, Feng Y, Guryanova OA, Xu J, Chen S, Lai Q, Sharma A, Xu B, Zhao Z, Feng R, Ni H, Claxton D, Guo Y, Mesa RA, Qiu Y, Yang FC, Li W, Nimer SD, Huang S, Xu M. HOXBLINC long non-coding RNA activation promotes leukemogenesis in NPM1-mutant acute myeloid leukemia. Nat Commun. 2021 Mar 29;12(1):1956. doi: 10.1038/s41467-021-22095-2. PubMed PMID: 33782403.
Reiner AS, Watt GP, John EM, Lynch CF, Brooks JD, Mellemkjær L, Boice JD, Knight JA, Concannon P, Smith SA, Liang X, Woods M, Shore R, Malone KE, Bernstein L; WECARE Collaborative Study Group, Bernstein JL. Smoking, Radiation Therapy, and Contralateral Breast Cancer Risk in Young Women. J Natl Cancer Inst. 2021 Mar 29. pii: djab047. doi: 10.1093/jnci/djab047. [Epub ahead of print] PubMed PMID: 33779721.
Burton EM, Akinyemi IA, Frey TR, Xu H, Li X, Su LJ, Zhi J, McIntosh MT, Bhaduri-McIntosh S. A heterochromatin inducing protein differentially recognizes self versus foreign genomes. PLoS Pathog. 2021 Mar 17;17(3):e1009447. doi: 10.1371/journal.ppat.1009447. eCollection 2021 Mar. PubMed PMID: 33730092.
Jooß K, Schachner LF, Watson R, Gillespie ZB, Howard SA, Cheek MA, Meiners MJ, Sobh A, Licht JD, Keogh MC, Kelleher NL. Separation and Characterization of Endogenous Nucleosomes by Native Capillary Zone Electrophoresis-Top-Down Mass Spectrometry. Anal Chem. 2021 Mar 30;93(12):5151-5160. doi: 10.1021/acs.analchem.0c04975. Epub 2021 Mar 22. PubMed PMID: 33749242.
Kang JW, Zhan Z, Ji G, Sang Y, Zhou D, Li Y, Feng H, Cheng T. PUMA facilitates EMI1-promoted cytoplasmic Rad51 ubiquitination and inhibits DNA repair in stem and progenitor cells. Signal Transduct Target Ther. 2021 Mar 31;6(1):129. doi: 10.1038/s41392-021-00510-w. PubMed PMID: 33785736.
Faivre B, Lombard M, Fakroun S, Vo CD, Goyenvalle C, Guérineau V, Pecqueur L, Fontecave M, De Crécy-Lagard V, Brégeon D, Hamdane D. Dihydrouridine synthesis in tRNAs is under reductive evolution in Mollicutes. RNA Biol. 2021 Mar 22:1-12. doi: 10.1080/15476286.2021.1899653. [Epub ahead of print] PubMed PMID: 33685366.
Naik NG, Lee SC, Alonso JD, Toth Z. KDM2B Overexpression Facilitates Lytic De Novo KSHV Infection by Inducing AP-1 Activity Through Interaction with the SCF E3 Ubiquitin Ligase Complex. J Virol. 2021 Mar 10. pii: JVI.00331-21. doi: 10.1128/JVI.00331-21. [Epub ahead of print] PubMed PMID: 33692209.
Chen X, Pan L, Wei J, Zhang R, Yang X, Song J, Bai RY, Fu S, Pierson CR, Finlay JL, Li C, Lin J. LLL12B, a small molecule STAT3 inhibitor, induces growth arrest, apoptosis, and enhances cisplatin-mediated cytotoxicity in medulloblastoma cells. Sci Rep. 2021 Mar 22;11(1):6517. doi: 10.1038/s41598-021-85888-x. PubMed PMID: 33753770; PubMed Central PMCID: PMC7985203.
Planell N, Lagani V, Sebastian-Leon P, van der Kloet F, Ewing E, Karathanasis N, Urdangarin A, Arozarena I, Jagodic M, Tsamardinos I, Tarazona S, Conesa A, Tegner J, Gomez-Cabrero D. STATegra: Multi-Omics Data Integration – A Conceptual Scheme With a Bioinformatics Pipeline. Front Genet. 2021 Mar 4;12:620453. doi: 10.3389/fgene.2021.620453. eCollection 2021. PubMed PMID: 33747045; PubMed Central PMCID: PMC7970106.
He Y, Li W, Zhang J, Yang Y, Qian YW, Zhou D. The curcumin analog EF24 is highly active against chemotherapy-resistant melanoma cells. Curr Cancer Drug Targets. 2021 Mar 2. doi: 10.2174/1568009621666210303092921. [Epub ahead of print] PubMed PMID: 33655859.
Viegas DJ, da Silva VD, Buarque CD, Bloom DC, Abreu PA. Antiviral activity of 1,4-disubstituted-1,2,3-triazoles against HSV-1 in vitro. Antivir Ther. 2021 Mar 11. doi: 10.3851/IMP3387. [Epub ahead of print] PubMed PMID: 33705354.
Zeng W, Yin X, Jiang Y, Jin L, Liang W. In vitro and ex vivo evaluation of tumor-derived exosome-induced dendritic cell dysfunction in mouse. STAR Protoc. 2021 Mar 4;2(1):100361. doi: 10.1016/j.xpro.2021.100361. eCollection 2021 Mar 19. PubMed PMID: 33786458; PubMed Central PMCID: PMC7988235.